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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG41369.1GDSL-like Lipase/Acylhydrolase family protein. (329 aa)    
Predicted Functional Partners:
SCG52328.1
Endoglucanase.
   
 0.628
SCG62366.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
   
 0.628
SCG34771.1
Hypothetical protein.
  
  0.565
SCG50410.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
   
 0.555
SCG43442.1
Hypothetical protein.
  
     0.545
SCG58006.1
Repeat domain-containing protein.
  
     0.538
SCG69857.1
Mannan endo-1,4-beta-mannosidase.
    
  0.532
SCG47108.1
Hypothetical protein.
  
 
   0.528
SCG67051.1
Hypothetical protein.
  
     0.524
SCG62567.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
  
 
   0.522
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.