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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG41652.1Uncharacterized conserved protein YtfP, gamma-glutamylcyclotransferase (GGCT)/AIG2-like family. (151 aa)    
Predicted Functional Partners:
SCG41660.1
Dihydrolipoamide dehydrogenase.
    
 0.855
SCG47886.1
Acetyltransferase (GNAT) family protein.
  
     0.687
SCG61953.1
Protein of unknown function.
  
     0.650
SCG60846.1
Phosphoglucomutase.
   
 
  0.513
SCG33870.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.491
SCG38627.1
Dihydrolipoamide dehydrogenase.
    
  0.491
SCG68204.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
    
  0.491
SCG45610.1
Hypothetical protein.
  
     0.486
SCG37163.1
Cystathionine gamma-synthase.
     
 0.434
SCG42339.1
Cystathionine gamma-lyase.
     
 0.434
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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