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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG41680.1ATP-binding cassette, subfamily B. (577 aa)    
Predicted Functional Partners:
SCG41674.1
ATP-binding cassette, subfamily B.
 
    
0.834
SCG41688.1
DNA-binding transcriptional regulator, MarR family.
       0.787
SCG41696.1
Uncharacterized membrane protein.
       0.771
SCG55348.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.767
SCG58800.1
Rifamycin polyketide synthase modules 1, 2 and 3.
   
 0.731
SCG70718.1
Polyketide synthase 12.
   
 0.731
SCG71526.1
Candicidin polyketide synthase FscB.
   
 0.731
SCG54266.1
Acyl transferase domain-containing protein.
  
 0.715
SCG52362.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.693
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.638
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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