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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG43180.1Uncharacterized protein, contains von Willebrand factor type A (vWA) domain. (650 aa)    
Predicted Functional Partners:
SCG43175.1
Magnesium chelatase subunit I.
 
    0.980
SCG71133.1
Hypothetical protein.
   
   0.861
SCG43187.1
Hypothetical protein.
       0.581
SCG51007.1
Adenosylhomocysteine nucleosidase.
    
   0.578
mqnB
Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
    
   0.578
SCG43168.1
Hypothetical protein.
       0.545
SCG50627.1
Conserved hypothetical protein.
 
     0.418
SCG51506.1
ACT domain.
  
     0.413
SCG50612.1
Probable phosphomutase, MSMEG_4193 family.
 
     0.409
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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