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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG45134.1Pyruvate dehydrogenase E1 component alpha subunit. (323 aa)    
Predicted Functional Partners:
SCG44938.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
SCG45128.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
SCG47088.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
SCG47095.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.986
SCG44934.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.985
SCG38631.1
2-oxoglutarate dehydrogenase E2 component.
 
 0.984
SCG39214.1
2-oxoisovalerate dehydrogenase E1 component.
 
0.984
SCG33915.1
2-oxoglutarate dehydrogenase E1 component.
 
 0.975
SCG38627.1
Dihydrolipoamide dehydrogenase.
 
 
 0.936
SCG68204.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
 
 
 0.907
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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