STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG45610.1Hypothetical protein. (536 aa)    
Predicted Functional Partners:
SCG45597.1
Hypothetical protein.
       0.785
SCG45604.1
Conserved hypothetical phage tail region protein.
       0.785
SCG45616.1
Hypothetical protein.
       0.785
SCG45623.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
       0.785
SCG45630.1
Hypothetical protein.
       0.785
SCG45637.1
Hypothetical protein.
       0.785
SCG45644.1
Putative baseplate assembly protein.
       0.785
SCG45649.1
Phage tail protein domain-containing protein.
       0.785
SCG45656.1
Hypothetical protein.
       0.773
SCG45663.1
Hypothetical protein.
       0.773
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.