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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG45739.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (293 aa)    
Predicted Functional Partners:
SCG45745.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.994
SCG45752.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.985
SCG54558.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.967
SCG34006.1
Multiple sugar transport system substrate-binding protein.
 
 0.956
SCG61228.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.950
SCG69519.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.949
SCG69528.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.949
SCG55439.1
Multiple sugar transport system permease protein.
  0.945
SCG43097.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.943
SCG67409.1
N-acetylglucosamine transport system permease protein.
 0.942
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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