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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG45773.1Glucuronate isomerase. (473 aa)    
Predicted Functional Partners:
SCG45788.1
Fructuronate reductase; Belongs to the mannitol dehydrogenase family.
 
 
 0.997
SCG45765.1
Oxidoreductase family, NAD-binding Rossmann fold.
 
  
  0.898
SCG55042.1
L-ribulose 5-phosphate 4-epimerase.
     
 0.894
SCG35709.1
Hypothetical protein.
     
 0.893
SCG45780.1
L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
     
 0.825
SCG45794.1
Predicted dehydrogenase.
 
  
  0.782
SCG43085.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.745
SCG45711.1
2-keto-3-deoxy-phosphogluconate aldolase.
 
   
 0.693
SCG57336.1
Beta-mannosidase.
  
 
 0.654
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.635
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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