| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCG45809.1 | SCG70017.1 | GA0070560_104251 | GA0070560_1331 | HD domain-containing protein. | Signal transduction histidine kinase. | 0.927 |
| SCG45809.1 | SCG70954.1 | GA0070560_104251 | GA0070560_13731 | HD domain-containing protein. | HAMP domain-containing protein. | 0.960 |
| SCG45809.1 | rplB | GA0070560_104251 | GA0070560_101369 | HD domain-containing protein. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.912 |
| SCG45809.1 | rplC | GA0070560_104251 | GA0070560_101372 | HD domain-containing protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.917 |
| SCG45809.1 | rplK | GA0070560_104251 | GA0070560_101385 | HD domain-containing protein. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.917 |
| SCG45809.1 | rplM | GA0070560_104251 | GA0070560_101311 | HD domain-containing protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.911 |
| SCG45809.1 | rpsE | GA0070560_104251 | GA0070560_101355 | HD domain-containing protein. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.912 |
| SCG45809.1 | rpsI | GA0070560_104251 | GA0070560_101310 | HD domain-containing protein. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.911 |
| SCG45809.1 | rpsL | GA0070560_104251 | GA0070560_101377 | HD domain-containing protein. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.916 |
| SCG45809.1 | rpsM | GA0070560_104251 | GA0070560_101348 | HD domain-containing protein. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.911 |
| SCG70017.1 | SCG45809.1 | GA0070560_1331 | GA0070560_104251 | Signal transduction histidine kinase. | HD domain-containing protein. | 0.927 |
| SCG70017.1 | SCG70954.1 | GA0070560_1331 | GA0070560_13731 | Signal transduction histidine kinase. | HAMP domain-containing protein. | 0.999 |
| SCG70954.1 | SCG45809.1 | GA0070560_13731 | GA0070560_104251 | HAMP domain-containing protein. | HD domain-containing protein. | 0.960 |
| SCG70954.1 | SCG70017.1 | GA0070560_13731 | GA0070560_1331 | HAMP domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
| SCG70954.1 | rpsL | GA0070560_13731 | GA0070560_101377 | HAMP domain-containing protein. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.582 |
| rplB | SCG45809.1 | GA0070560_101369 | GA0070560_104251 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | HD domain-containing protein. | 0.912 |
| rplB | rplC | GA0070560_101369 | GA0070560_101372 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
| rplB | rplK | GA0070560_101369 | GA0070560_101385 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.998 |
| rplB | rplM | GA0070560_101369 | GA0070560_101311 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| rplB | rpsE | GA0070560_101369 | GA0070560_101355 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
STRING v12.5 is now available!
