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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG46051.1D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family. (325 aa)    
Predicted Functional Partners:
SCG46057.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.959
SCG46064.1
Glycosyl transferases group 1.
 
    0.954
SCG46071.1
Methyltransferase domain-containing protein.
 
    0.951
SCG46079.1
Uncharacterized membrane protein YbhN, UPF0104 family.
 
    0.909
SCG46044.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.907
SCG46036.1
Hypothetical protein.
 
     0.875
SCG46092.1
5-amino-6-(5-phosphoribosylamino)uracil reductase.
 
    0.803
SCG61468.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.730
SCG51426.1
8-amino-7-oxononanoate synthase.
  
 
  0.718
SCG54188.1
8-amino-7-oxononanoate synthase.
  
 
  0.718
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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