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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG44451.1Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6. (599 aa)    
Predicted Functional Partners:
SCG68622.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
  
0.932
SCG52328.1
Endoglucanase.
 
 
 
0.915
SCG68516.1
Carbohydrate binding domain-containing protein.
  
  
0.915
SCG54904.1
Endoglucanase.
 
  
 
0.909
SCG54574.1
Exo-1,4-beta-glucosidase.
 
  
  0.908
SCG51469.1
Processive endocellulase.
  
  
 
0.905
SCG62366.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
 
 
 
0.900
SCG43195.1
Ricin-type beta-trefoil lectin domain-containing protein.
  
 
  0.761
SCG66626.1
Endo-1,4-beta-xylanase.
  
   
 0.761
SCG54354.1
Beta-xylosidase.
 
 
  0.738
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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