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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG44465.1Sortase family protein. (241 aa)    
Predicted Functional Partners:
SCG38392.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
 
 0.961
SCG36080.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
  
 0.956
SCG66222.1
Multicopper oxidase.
   
  0.919
SCG70346.1
Nitric oxide reductase, NorZ apoprotein.
  
 0.917
SCG37288.1
Glutamate synthase (NADH) large subunit.
    
  0.880
SCG47633.1
WD40-like Beta Propeller Repeat.
   
   0.876
SCG44458.1
Hypothetical protein.
       0.773
SCG71117.1
Amino acid adenylation domain-containing protein.
  
 
  0.762
SCG50655.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.760
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.720
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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