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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG47697.1CBS domain-containing protein. (139 aa)    
Predicted Functional Partners:
SCG37288.1
Glutamate synthase (NADH) large subunit.
    
 0.821
SCG53899.1
MFS transporter, NNP family, nitrate/nitrite transporter.
   
    0.779
SCG69952.1
Nitroreductase family.
   
  
 0.774
SCG49583.1
Nitroreductase.
   
  
 0.770
SCG69935.1
Nitroreductase.
   
  
 0.770
SCG50753.1
Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family.
   
    0.769
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.766
SCG48681.1
CBS domain-containing protein.
  
     0.721
SCG40569.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.644
SCG41721.1
IMP dehydrogenase.
    
 0.637
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.