Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCG47057.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.788
SCG47063.1
8-oxo-dGTP diphosphatase.
 
  
  0.729
SCG39007.1
Probable phosphoglycerate mutase.
  
 
  0.678
SCG50994.1
8-oxo-dGTP diphosphatase.
  
  
  0.671
SCG48428.1
PAS/PAC sensor signal transduction histidine kinase.
    
  0.656
SCG34158.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.643
SCG53279.1
Alkaline phosphatase D.
     
  0.641
SCG64207.1
Alkaline phosphatase D.
     
  0.635
SCG35647.1
5'-nucleotidase /3'-nucleotidase.
    
 0.626
SCG37901.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
   
 
  0.622
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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