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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG47135.1Sensor histidine kinase inhibitor, KipI family. (203 aa)    
Predicted Functional Partners:
SCG47122.1
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
SCG47130.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 0.999
SCG55532.1
Hypothetical protein.
  
 
 0.923
SCG37288.1
Glutamate synthase (NADH) large subunit.
   
 
  0.883
SCG57520.1
Transcriptional regulator, IclR family.
  
    0.780
SCG59690.1
PrgI family protein.
  
    0.780
SCG61213.1
IclR helix-turn-helix domain-containing protein.
  
    0.780
SCG63188.1
Transcriptional regulator, IclR family.
  
    0.780
SCG44471.1
Glutamate dehydrogenase.
    
  0.740
SCG54051.1
Acetyl-CoA carboxylase, carboxyltransferase component.
  
 
  0.682
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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