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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG50861.1dTDP-glucose 4,6-dehydratase. (315 aa)    
Predicted Functional Partners:
SCG50855.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.999
SCG50869.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
 
 0.999
SCG50876.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 0.995
SCG58474.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.985
SCG46266.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.982
SCG58656.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.982
SCG42445.1
UDPglucose 6-dehydrogenase.
  
 
 0.976
SCG50835.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.963
SCG50830.1
Glycosyltransferase, GT2 family.
 
  
 0.953
SCG60898.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.950
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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