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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG51034.1Kanosamine 6-kinase. (311 aa)    
Predicted Functional Partners:
SCG51019.1
Shikimate dehydrogenase.
 
     0.802
SCG58355.1
AHBA synthesis associated protein.
  
  
  0.802
SCG51075.1
AHBA synthesis associated protein.
  
  
  0.792
SCG38273.1
Glucokinase.
  
  
 
0.787
SCG51042.1
DoxX-like family protein.
       0.786
SCG57589.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
  
 
0.774
SCG51027.1
NAD(P)H-dependent FMN reductase.
       0.773
SCG46311.1
AHBA synthesis associated protein.
  
  
  0.770
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.764
SCG66767.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
     0.762
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.