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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG49846.1PemK-like, MazF-like toxin of type II toxin-antitoxin system. (163 aa)    
Predicted Functional Partners:
SCG49839.1
Methyltransferase domain-containing protein.
       0.588
SCG48964.1
Transcriptional regulator, HxlR family.
   
    0.560
SCG54664.1
Transcriptional regulator, HxlR family.
   
    0.560
SCG59890.1
Transcriptional regulator, HxlR family.
   
    0.560
SCG61794.1
Transcriptional regulator, HxlR family.
   
    0.560
SCG64568.1
Transcriptional regulator, HxlR family.
   
    0.560
SCG71773.1
Transcriptional regulator, HxlR family.
   
    0.560
SCG67057.1
ATP-, maltotriose-and DNA-dependent transcriptional regulator MalT.
  
     0.451
SCG53527.1
Hypothetical protein.
  
     0.450
SCG49832.1
NUDIX domain-containing protein; Belongs to the Nudix hydrolase family.
  
    0.441
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.