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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG51873.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (222 aa)    
Predicted Functional Partners:
SCG70954.1
HAMP domain-containing protein.
  
 0.998
SCG48428.1
PAS/PAC sensor signal transduction histidine kinase.
 0.988
SCG70017.1
Signal transduction histidine kinase.
 
 0.986
SCG51865.1
Signal transduction histidine kinase.
 
 0.984
SCG35939.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.893
SCG45997.1
Signal transduction histidine kinase.
 
 0.860
SCG52904.1
GAF domain-containing protein.
 
0.842
SCG33901.1
Two-component system, OmpR family, sensor kinase.
 0.834
SCG42877.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 0.788
SCG60144.1
Signal transduction histidine kinase.
  0.788
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.