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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG53854.1Hemerythrin HHE cation binding domain-containing protein. (146 aa)    
Predicted Functional Partners:
SCG53849.1
Uncharacterized conserved protein, DUF2249 family.
 
     0.650
SCG70515.1
Peptide chain release factor.
  
     0.625
SCG53844.1
Transcriptional regulator.
 
     0.612
SCG54067.1
Uracil-DNA glycosylase; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
  
     0.566
SCG51007.1
Adenosylhomocysteine nucleosidase.
  
     0.524
SCG53840.1
Hypothetical protein.
 
     0.522
SCG53835.1
Hypothetical protein.
 
     0.514
SCG57144.1
Hypothetical protein.
  
     0.505
SCG53829.1
Nitrite reductase (NO-forming).
 
     0.502
SCG66199.1
NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family.
  
     0.491
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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