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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG53748.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
SCG53775.1
Hypothetical protein.
 
    0.966
SCG53771.1
Oxygen-independent coproporphyrinogen-3 oxidase.
 
    0.964
SCG53757.1
Glutathione synthase/RimK-type ligase, ATP-grasp superfamily.
 
    0.962
SCG53764.1
Sulfatase.
 
     0.961
SCG53755.1
Hypothetical protein.
 
    
0.797
SCG59559.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
 
    0.671
SCG44437.1
Hypothetical protein.
  
     0.542
SCG53745.1
Protein of unknown function.
       0.541
SCG43269.1
Hypothetical protein.
  
     0.510
SCG51707.1
FtsX-like permease family protein.
  
     0.473
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.