close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG55465.16-O-methylguanine DNA methyltransferase, DNA binding domain. (848 aa)    
Predicted Functional Partners:
SCG37288.1
Glutamate synthase (NADH) large subunit.
     
 0.684
SCG55487.1
Uncharacterized conserved protein YukE; Belongs to the WXG100 family.
 
     0.580
SCG34053.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily.
       0.576
SCG34055.1
Superfamily I DNA or RNA helicase; Belongs to the helicase family. UvrD subfamily.
       0.576
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
       0.576
SCG55472.1
Hypothetical protein.
 
     0.576
SCG34031.1
ATP-dependent DNA helicase, Rep family.
  
    0.538
SCG55480.1
Excreted virulence factor EspC, type VII ESX diderm.
       0.518
SCG55493.1
Hypothetical protein.
       0.518
SCG71169.1
SRSO17 transposase.
 
     0.493
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.