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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG55014.1Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (330 aa)    
Predicted Functional Partners:
SCG55030.1
Simple sugar transport system ATP-binding protein.
 0.999
SCG55036.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.998
SCG55022.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.988
SCG34447.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 0.984
SCG34443.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
 0.879
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
   
 0.820
SCG34451.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.769
SCG41361.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
  0.674
SCG43092.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
  
  
  0.658
SCG55003.1
Transcriptional regulator, LacI family.
 
 
  0.640
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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