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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG56190.1Anion-transporting ATPase, ArsA/GET3 family. (381 aa)    
Predicted Functional Partners:
SCG56197.1
Arsenite efflux ATP-binding protein ArsA.
 
 
 0.998
pyrF
Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
   0.857
SCG35839.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.739
SCG35844.1
UDP-glucose 4-epimerase.
  
     0.735
SCG49701.1
Transcriptional regulator, ArsR family; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.714
SCG35979.1
Putative sensory transduction regulator.
  
     0.659
SCG53545.1
Arsenate reductase; Belongs to the ArsC family.
    
 0.643
SCG34026.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
  
     0.628
SCG38283.1
Polyketide cyclase / dehydrase and lipid transport.
 
     0.623
SCG56203.1
Hypothetical protein.
       0.604
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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