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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG58010.1Intein C-terminal splicing region/intein N-terminal splicing region/RHS repeat-associated core domain-containing protein. (2541 aa)    
Predicted Functional Partners:
SCG70496.1
Hypothetical protein.
 
  0.782
SCG71558.1
Hypothetical protein.
 
  0.751
SCG33808.1
3',5'-cyclic AMP phosphodiesterase CpdA.
 
     0.527
SCG70788.1
Hypothetical protein.
  
     0.513
SCG69660.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.458
SCG34065.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
    0.454
SCG45822.1
Ribonuclease.
  
     0.449
SCG42685.1
ABC-2 family transporter protein.
  
     0.439
SCG38066.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
  
 
  0.433
SCG72360.1
Transposase DDE domain group 1.
  
     0.427
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.