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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG57323.1Cellobiose transport system permease protein. (337 aa)    
Predicted Functional Partners:
SCG57328.1
Cellobiose transport system permease protein.
  0.997
SCG61228.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.990
SCG62683.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.988
SCG69528.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.987
SCG41317.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.985
SCG36033.1
Cellobiose ABC transporter membrane protein.
  0.965
SCG51534.1
Cellobiose ABC transporter membrane protein.
  0.965
SCG57317.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
  0.965
SCG41303.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.952
SCG43104.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.938
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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