STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG57349.1Sulfate permease, SulP family. (554 aa)    
Predicted Functional Partners:
SCG50355.1
Hypothetical protein.
    
 
 0.914
SCG38385.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
    
   0.907
SCG62497.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
 
 0.894
SCG36647.1
Alpha-tubulin suppressor.
    
   0.888
SCG46370.1
Rifamycin polyketide synthase modules 9 and 10.
    
   0.888
SCG46381.1
Acyl transferase domain-containing protein.
    
   0.888
SCG49790.1
Acyl transferase domain-containing protein.
    
   0.888
SCG58248.1
Polyketide synthase 12.
    
   0.888
SCG58280.1
Acyl transferase domain-containing protein.
    
   0.888
SCG58775.1
Ketoacyl-synthetase C-terminal extension.
    
   0.888
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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