close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG58981.1Protein of unknown function. (328 aa)    
Predicted Functional Partners:
SCG58949.1
Repeat domain-containing protein.
 
  
  0.975
SCG58954.1
Hypothetical protein.
 
  
  0.975
SCG58975.1
Cytochrome P450.
 
  
  0.952
SCG58966.1
Enediyne biosynthesis thioesterase.
 
     0.809
SCG59000.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.801
SCG58891.1
Hypothetical protein.
 
     0.783
SCG59021.1
Hypothetical protein.
 
     0.783
SCG58961.1
Enediyne polyketide synthase.
 
     0.774
SCG59092.1
Acyl-CoA dehydrogenase.
  
     0.752
SCG34489.1
TIGR03083 family protein.
  
     0.699
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.