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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG59010.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (291 aa)    
Predicted Functional Partners:
SCG54266.1
Acyl transferase domain-containing protein.
  
 0.801
SCG59006.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.785
SCG58800.1
Rifamycin polyketide synthase modules 1, 2 and 3.
  
 
 0.774
SCG70718.1
Polyketide synthase 12.
  
 
 0.774
SCG71526.1
Candicidin polyketide synthase FscB.
  
 
 0.774
SCG54250.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
  
 0.699
SCG46370.1
Rifamycin polyketide synthase modules 9 and 10.
  
 
 0.686
SCG46381.1
Acyl transferase domain-containing protein.
  
 
 0.686
SCG58775.1
Ketoacyl-synthetase C-terminal extension.
  
 
 0.686
SCG71112.1
Ketoacyl-synthetase C-terminal extension.
  
 
 0.686
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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