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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG59021.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
SCG58954.1
Hypothetical protein.
 
     0.791
SCG58949.1
Repeat domain-containing protein.
 
     0.790
SCG58981.1
Protein of unknown function.
 
     0.783
SCG58966.1
Enediyne biosynthesis thioesterase.
  
     0.773
SCG59000.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.773
SCG59016.1
Hypothetical protein.
       0.773
SCG58961.1
Enediyne polyketide synthase.
  
     0.770
SCG34489.1
TIGR03083 family protein.
  
     0.718
SCG59092.1
Acyl-CoA dehydrogenase.
  
     0.701
SCG58915.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.663
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.