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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG59658.1DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. (290 aa)    
Predicted Functional Partners:
SCG59675.1
Hypothetical protein.
 
    0.806
SCG59681.1
Hypothetical protein.
  
    0.773
SCG59685.1
Hypothetical protein.
  
    0.771
SCG59690.1
PrgI family protein.
  
     0.757
SCG59700.1
DNA helicase HerA, contains HAS-barrel and ATPase domains.
  
     0.717
SCG59694.1
AAA-like domain-containing protein.
  
     0.689
SCG59651.1
Hypothetical protein.
 
     0.687
SCG59780.1
AAA domain (dynein-related subfamily).
  
     0.671
SCG59706.1
Replication-relaxation.
  
     0.666
SCG59654.1
DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
     0.659
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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