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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG59559.1Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. (300 aa)    
Predicted Functional Partners:
SCG53757.1
Glutathione synthase/RimK-type ligase, ATP-grasp superfamily.
 
    0.724
SCG59554.1
Methionine adenosyltransferase.
       0.718
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.712
SCG53748.1
Hypothetical protein.
 
    0.671
SCG53755.1
Hypothetical protein.
 
    0.670
SCG53775.1
Hypothetical protein.
  
     0.651
SCG53764.1
Sulfatase.
 
     0.645
SCG53771.1
Oxygen-independent coproporphyrinogen-3 oxidase.
 
  
 0.639
SCG54266.1
Acyl transferase domain-containing protein.
  
  
 0.622
SCG48169.1
Molybdopterin synthase subunit MoaE.
  
 
 0.606
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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