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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG60947.1dGTPase; Belongs to the dGTPase family. Type 2 subfamily. (503 aa)    
Predicted Functional Partners:
SCG63654.1
dGTPase; Belongs to the dGTPase family. Type 2 subfamily.
  
  
 
0.902
SCG35647.1
5'-nucleotidase /3'-nucleotidase.
    
  0.881
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
 
  0.872
SCG53625.1
Putative hydrolase of the HAD superfamily.
    
  0.623
SCG37288.1
Glutamate synthase (NADH) large subunit.
       0.576
SCG40428.1
Helix-turn-helix domain-containing protein.
  
     0.571
SCG60634.1
DNA gyrase subunit A.
  
  
  0.556
SCG60940.1
Uncharacterized protein.
       0.528
SCG70638.1
Anti-sigma-D factor RsdA to sigma factor binding region.
  
     0.499
SCG54800.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
 
  
  0.479
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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