STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG61045.1Protein N-acetyltransferase, RimJ/RimL family. (191 aa)    
Predicted Functional Partners:
SCG61050.1
Siderophore synthetase component.
 
 0.997
SCG61042.1
Lysine N6-hydroxylase.
 
 
  0.984
SCG61036.1
L-2,4-diaminobutyrate decarboxylase.
 
 
  0.941
SCG59411.1
L-ornithine N5-oxygenase.
 
 
  0.827
SCG61056.1
Drug resistance transporter, EmrB/QacA subfamily.
  
    0.774
SCG61020.1
Penicillin amidase.
     0.739
SCG33919.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.696
SCG37288.1
Glutamate synthase (NADH) large subunit.
   
 
  0.596
SCG61023.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
    0.585
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.475
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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