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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG60708.1Glycosyl transferase family 2. (372 aa)    
Predicted Functional Partners:
SCG63833.1
Acyltransferase family protein.
  
 
 0.815
SCG60755.1
Teichoic acid transport system ATP-binding protein.
 
 
 0.780
SCG54266.1
Acyl transferase domain-containing protein.
  
 0.757
SCG60757.1
Teichoic acid transport system permease protein.
 
  
 0.743
SCG47406.1
Polymer biosynthesis protein, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
  
 0.742
SCG60702.1
N-acetylneuraminate synthase.
  
  
 0.728
SCG50861.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.676
SCG54250.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
  
 0.676
SCG48618.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.674
SCG48665.1
Choline kinase.
 
  
 0.673
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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