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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG62055.1Pimeloyl-ACP methyl ester carboxylesterase. (295 aa)    
Predicted Functional Partners:
SCG54266.1
Acyl transferase domain-containing protein.
  
 0.953
SCG62026.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.920
SCG62047.1
Protein of unknown function.
 
     0.906
SCG54250.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
   
 0.884
SCG62061.1
Misacylated tRNA(Ala) deacylase.
       0.863
SCG54294.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.844
SCG51082.1
Condensation domain-containing protein.
   
 0.808
SCG72388.1
AMP-binding enzyme.
   
 0.808
SCG58800.1
Rifamycin polyketide synthase modules 1, 2 and 3.
  
 0.780
SCG70718.1
Polyketide synthase 12.
  
 0.780
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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