close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG61623.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
SCG61636.1
Hypothetical protein.
 
 
 0.991
SCG61629.1
Protein of unknown function.
 
  
 0.985
SCG61641.1
Signal transduction histidine kinase.
 
     0.965
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
    
 0.964
SCG44413.1
Hypothetical protein.
 
 
 0.937
SCG53583.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
 
 
 0.937
SCG34656.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
 
 
 0.934
SCG41462.1
Hypothetical protein.
 
 
 0.934
SCG59569.1
Hypothetical protein.
 
 
 0.934
SCG69572.1
Hypothetical protein.
 
 
 0.934
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.