STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG62286.1Signal transduction histidine kinase. (370 aa)    
Predicted Functional Partners:
SCG62280.1
Two component transcriptional regulator, LuxR family.
 
  0.967
SCG43607.1
Two component transcriptional regulator, LuxR family.
 
  0.845
SCG70628.1
Two-component system, NarL family, response regulator DesR.
  
  0.845
SCG39327.1
Two component transcriptional regulator, LuxR family.
  
  0.844
SCG43160.1
Two component transcriptional regulator, LuxR family.
  
  0.843
SCG44739.1
Two component transcriptional regulator, LuxR family.
  
  0.843
SCG50732.1
Two component transcriptional regulator, LuxR family.
  
  0.843
SCG70622.1
Two-component system, NarL family, response regulator DesR.
  
  0.841
SCG38188.1
Two component transcriptional regulator, LuxR family.
  
  0.840
SCG66416.1
Two component transcriptional regulator, LuxR family.
  
  0.840
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.