close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG62688.1CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase. (724 aa)    
Predicted Functional Partners:
SCG62700.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.914
SCG62707.1
ABC-2 type transport system permease protein.
 
  
 0.911
SCG60755.1
Teichoic acid transport system ATP-binding protein.
 
 
 0.852
SCG60757.1
Teichoic acid transport system permease protein.
 
  
 0.823
SCG63833.1
Acyltransferase family protein.
  
 
 0.815
SCG62694.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
    0.797
SCG54266.1
Acyl transferase domain-containing protein.
  
 0.757
SCG47406.1
Polymer biosynthesis protein, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
  
 0.742
SCG48665.1
Choline kinase.
 
  
 0.730
SCG70930.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
 
 0.691
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.