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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG63952.1Phosphotransferase enzyme family protein. (338 aa)    
Predicted Functional Partners:
SCG53688.1
Protein of unknown function.
    
  0.783
thiL
Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
     
 0.601
SCG63941.1
Protein of unknown function.
       0.550
SCG63945.1
Protein of unknown function.
       0.550
rpsT
SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.
       0.544
SCG34143.1
ABC-2 type transport system permease protein.
  
     0.515
SCG67292.1
Hypothetical protein.
  
     0.473
SCG34140.1
ABC-2 type transport system permease protein.
  
     0.461
SCG34714.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
     
 0.443
SCG60864.1
Methyltransferase domain-containing protein.
    
 0.440
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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