rpsT protein (Micromonospora halophytica) - STRING interaction network

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rpsT

SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (88 aa)

Predicted Functional Partners:

rpsF

0.999

rplU

0.998

rpsO

0.996

rpsP

0.996

rpmB

0.996

rpsI

0.995

rplM

0.995

rpmA

0.995

rplF

0.994

rpsB

0.994

Your Current Organism:

Micromonospora halophytica

NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplF	rplM	GA0070560_101357	GA0070560_101311	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplF	rplU	GA0070560_101357	GA0070560_119106	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplF	rpmA	GA0070560_101357	GA0070560_119105	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplF	rpmB	GA0070560_101357	GA0070560_11199	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplF	rpsB	GA0070560_101357	GA0070560_111156	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.997
rplF	rpsF	GA0070560_101357	GA0070560_105203	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplF	rpsI	GA0070560_101357	GA0070560_101310	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.998
rplF	rpsO	GA0070560_101357	GA0070560_107214	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
rplF	rpsP	GA0070560_101357	GA0070560_111136	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rplF	rpsT	GA0070560_101357	GA0070560_11964	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.994
rplM	rplF	GA0070560_101311	GA0070560_101357	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.999
rplM	rplU	GA0070560_101311	GA0070560_119106	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplM	rpmA	GA0070560_101311	GA0070560_119105	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplM	rpmB	GA0070560_101311	GA0070560_11199	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.995
rplM	rpsB	GA0070560_101311	GA0070560_111156	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.997
rplM	rpsF	GA0070560_101311	GA0070560_105203	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplM	rpsI	GA0070560_101311	GA0070560_101310	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	GA0070560_101311	GA0070560_107214	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
rplM	rpsP	GA0070560_101311	GA0070560_111136	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rplM	rpsT	GA0070560_101311	GA0070560_11964	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.995

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