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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG63689.1Peptidase_C39 like family protein. (216 aa)    
Predicted Functional Partners:
SCG47633.1
WD40-like Beta Propeller Repeat.
  
 0.916
SCG42440.1
Hypothetical protein.
 
 
 
 0.771
SCG63027.1
Hypothetical protein.
  
    0.677
SCG47108.1
Hypothetical protein.
  
 
  0.669
SCG50127.1
Arylsulfatase A.
  
     0.662
SCG64229.1
Glyoxalase-like domain-containing protein.
  
     0.643
SCG42883.1
Lipoprotein LpqB beta-propeller domain-containing protein.
  
     0.634
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.629
SCG60800.1
Hypothetical protein.
  
     0.627
SCG48135.1
Protein of unknown function.
  
     0.601
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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