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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG64770.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
SCG64780.1
KDO2-lipid IV(A) lauroyltransferase.
 
     0.930
SCG64774.1
Phosphatidylinositol alpha-mannosyltransferase.
 
     0.921
SCG64785.1
CDP-diacylglycerol inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.876
SCG38320.1
Phosphatidylinositol alpha-1,6-mannosyltransferase.
  
     0.588
SCG42936.1
Hypothetical protein.
  
     0.562
SCG34079.1
Acetyltransferase (GNAT) family protein.
  
     0.549
SCG64790.1
Translation elongation factor 2 (EF-2/EF-G).
       0.539
SCG55938.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.532
pdxS
Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
       0.531
SCG63374.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.502
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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