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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG64415.1O-antigen ligase like membrane protein. (473 aa)    
Predicted Functional Partners:
SCG64408.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.975
SCG64403.1
Sulfotransferase domain-containing protein.
 
     0.941
SCG64425.1
Chain length determinant protein.
 
  
 0.909
SCG48618.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.900
SCG44381.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.899
SCG64421.1
Glycosyltransferase, GT2 family.
 
  
 0.896
SCG66930.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.885
SCG64433.1
Hypothetical protein.
 
     0.857
SCG68734.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
  
 
 0.838
SCG64450.1
Hypothetical protein.
 
    0.827
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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