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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG65363.1Transcriptional regulator, AsnC family. (155 aa)    
Predicted Functional Partners:
SCG37169.1
Transcriptional regulator, AsnC family.
  
     0.771
SCG56823.1
Transcriptional regulator, AsnC family.
  
     0.769
SCG44956.1
Transcriptional regulator, AsnC family.
  
     0.757
SCG65298.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
  
 
 0.640
SCG40569.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.605
SCG47095.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
    
  0.585
SCG69554.1
Phenazine biosynthesis protein phzE.
   
 
  0.585
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
       0.526
SCG65381.1
Aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.507
kynU-2
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
       0.499
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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