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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG65885.1Amino acid ABC transporter membrane protein, PAAT family. (281 aa)    
Predicted Functional Partners:
SCG65892.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.998
SCG65879.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.997
SCG62607.1
Polar amino acid transport system ATP-binding protein.
 0.983
SCG52362.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.979
SCG50948.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.978
SCG50962.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  0.937
SCG56268.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.929
SCG43045.1
Glutamate transport system substrate-binding protein.
 
  0.926
SCG52367.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.916
SCG62617.1
Polar amino acid transport system substrate-binding protein.
 
  0.856
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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