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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG66897.1Cobalt/nickel transport protein. (132 aa)    
Predicted Functional Partners:
SCG66882.1
Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.999
SCG66890.1
Cobalt/nickel transport system permease protein.
 
 0.999
SCG66901.1
Cobalt/nickel transport system permease protein.
 
  
  0.992
SCG63792.1
Energy-coupling factor transport system permease protein.
  
 0.984
SCG45455.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
  
  
 0.895
SCG62842.1
Phosphoglycolate phosphatase.
  
    0.768
SCG35826.1
Hypothetical protein.
  
     0.580
SCG66907.1
Peroxiredoxin Q/BCP.
       0.570
SCG45461.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
 
 0.543
cbiD
cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
 
 0.523
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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