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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG66920.1Methyltransferase domain-containing protein. (277 aa)    
Predicted Functional Partners:
SCG65180.1
Hypothetical protein.
  
     0.749
SCG67051.1
Hypothetical protein.
  
     0.734
SCG70718.1
Polyketide synthase 12.
 
 
 0.723
SCG35876.1
Peptidase MA superfamily.
  
     0.722
SCG34771.1
Hypothetical protein.
  
    0.720
SCG62552.1
Type VII secretion protein EccE.
  
     0.720
SCG42944.1
Hypothetical protein.
  
  
 0.691
SCG34201.1
Interferon-induced transmembrane protein.
  
     0.678
SCG48781.1
Predicted membrane protein.
  
     0.677
SCG58800.1
Rifamycin polyketide synthase modules 1, 2 and 3.
   
 0.671
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.