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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG66930.1Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. (517 aa)    
Predicted Functional Partners:
SCG44639.1
Capsular exopolysaccharide family.
 
 
 0.995
SCG64425.1
Chain length determinant protein.
  
 
 0.990
SCG60898.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.965
SCG42498.1
Mannose-1-phosphate guanylyltransferase.
 
 
 0.952
SCG50830.1
Glycosyltransferase, GT2 family.
 
 
 0.936
SCG60923.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.934
SCG58023.1
Transposase DDE domain-containing protein.
  
 
 0.932
SCG60300.1
Hypothetical protein.
  
 
 0.932
SCG66172.1
Hypothetical protein.
  
 
 0.932
SCG66946.1
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
 0.932
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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