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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG67367.1Hypothetical protein. (441 aa)    
Predicted Functional Partners:
SCG67374.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family.
  
  0.997
SCG69794.1
Tetratricopeptide repeat-containing protein.
  
     0.677
SCG41490.1
Hypothetical protein.
  
     0.650
SCG56612.1
Septum formation.
  
     0.586
SCG55907.1
Peptidase family M23.
  
     0.538
SCG48400.1
Hypothetical protein.
  
     0.531
SCG47052.1
Hypothetical protein.
  
     0.527
SCG51846.1
Hypothetical protein.
  
     0.526
SCG65936.1
Septum formation.
  
     0.524
SCG35453.1
Hypothetical protein.
  
     0.516
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.